Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | B0O44_11017 | Not Available | Negative | 5180167 - 5181297 | 41581.5 |
| dna-binding lrp family transcriptional regulator | B0O44_11018 | Not Available | Positive | 5181550 - 5182023 | 18255.3 |
| uncharacterized lipoprotein yddw (upf0748 family) | B0O44_11019 | Not Available | Negative | 5182034 - 5183599 | 59294.9 |
| dnaj-like protein | B0O44_11020 | Not Available | Negative | 5183661 - 5184107 | 17421.7 |
| uncharacterized protein duf4440 | B0O44_11021 | Not Available | Negative | 5184225 - 5184770 | 20956.5 |
| tetr family transcriptional regulator | B0O44_11022 | Not Available | Positive | 5184825 - 5185469 | 23848.9 |
| chemotaxis protein motb | B0O44_11023 | Not Available | Negative | 5185507 - 5186370 | 31772.6 |
| hypothetical protein | B0O44_11024 | Not Available | Negative | 5186561 - 5187442 | 31659.4 |
| hypothetical protein | B0O44_11025 | Not Available | Negative | 5187757 - 5187909 | 5711.99 |
| dha1 family bicyclomycin/chloramphenicol resistance-like mfs transporter | B0O44_11026 | Not Available | Negative | 5187954 - 5189144 | 42450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

