Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated protein | B0O44_1107 | Not Available | Negative | 5164637 - 5168116 | 126671.0 |
| yd repeat-containing protein | B0O44_1108 | Not Available | Negative | 5168128 - 5171280 | 117700.0 |
| hypothetical protein | B0O44_1109 | Not Available | Negative | 5171577 - 5172197 | 23626.3 |
| hypothetical protein | B0O44_11010 | Not Available | Negative | 5172282 - 5172788 | 19798.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_11011 | Not Available | Negative | 5173276 - 5173842 | 21955.6 |
| putative transposase ydad | B0O44_11012 | Not Available | Positive | 5174070 - 5175050 | 37980.4 |
| hypothetical protein | B0O44_11013 | Not Available | Positive | 5175057 - 5175272 | 7841.74 |
| dna polymerase-3 subunit alpha | B0O44_11014 | Not Available | Negative | 5175296 - 5178244 | 112958.0 |
| dna polymerase-4 | B0O44_11015 | Not Available | Negative | 5178248 - 5179423 | 44444.9 |
| response regulator receiver domain-containing protein | B0O44_11016 | Not Available | Positive | 5179630 - 5180010 | 14419.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

