Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | B0O44_109241 | Not Available | Negative | 5155637 - 5156578 | 36237.1 |
| mannose-1-phosphate guanylyltransferase | B0O44_109242 | Not Available | Negative | 5156607 - 5157659 | 39504.3 |
| gdp-l-fucose synthase | B0O44_109243 | Not Available | Negative | 5157688 - 5158620 | 34633.8 |
| dtdp-glucose 4,6-dehydratase | B0O44_109244 | Not Available | Negative | 5158627 - 5159190 | 21549.8 |
| secretin/tonb-like protein | B0O44_1101 | Not Available | Negative | 5159191 - 5159828 | 23795.0 |
| fecr family protein | B0O44_1102 | Not Available | Negative | 5160032 - 5161141 | 40593.5 |
| uncharacterized protein duf5071 | B0O44_1103 | Not Available | Negative | 5161443 - 5161838 | 14832.8 |
| hypothetical protein | B0O44_1104 | Not Available | Negative | 5162012 - 5163148 | 43492.6 |
| hypothetical protein | B0O44_1105 | Not Available | Negative | 5163472 - 5164125 | 26176.1 |
| hypothetical protein | B0O44_1106 | Not Available | Negative | 5164270 - 5164620 | 13675.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

