Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | B0O44_109231 | Not Available | Negative | 5140171 - 5141358 | 44916.3 |
| type ix secretion system porp/sprf family membrane protein | B0O44_109232 | Not Available | Positive | 5141642 - 5142670 | 37872.3 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductase | B0O44_109233 | Not Available | Negative | 5142715 - 5144655 | 72596.6 |
| aspartate aminotransferase/cystathionine beta-lyase | B0O44_109234 | Not Available | Negative | 5144725 - 5145894 | 43044.8 |
| response regulator receiver domain-containing protein | B0O44_109235 | Not Available | Negative | 5145904 - 5146293 | 14927.0 |
| pas domain s-box-containing protein | B0O44_109236 | Not Available | Negative | 5146268 - 5148286 | 76615.1 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | B0O44_109237 | Not Available | Negative | 5148564 - 5150402 | 67806.9 |
| udp-n-acetyl-d-galactosamine dehydrogenase | B0O44_109238 | Not Available | Negative | 5150637 - 5151920 | 47425.2 |
| hypothetical protein | B0O44_109239 | Not Available | Negative | 5151932 - 5153539 | 61899.3 |
| flaa1/epsc-like ndp-sugar epimerase | B0O44_109240 | Not Available | Negative | 5153562 - 5155496 | 72471.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

