Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring factor envc (amia/amib activator) | B0O44_109211 | Not Available | Negative | 5113670 - 5114926 | 47354.8 |
| uncharacterized protein duf4292 | B0O44_109212 | Not Available | Negative | 5114948 - 5115739 | 29555.0 |
| tetratricopeptide repeat protein | B0O44_109213 | Not Available | Negative | 5115717 - 5117087 | 51619.3 |
| dutp pyrophosphatase | B0O44_109214 | Not Available | Negative | 5117090 - 5117521 | 15534.7 |
| o-antigen/teichoic acid export membrane protein | B0O44_109215 | Not Available | Negative | 5117526 - 5119007 | 56747.1 |
| acylphosphatase | B0O44_109216 | Not Available | Negative | 5119064 - 5119336 | 10295.3 |
| enoyl-[acyl-carrier protein] reductase ii | B0O44_109217 | Not Available | Negative | 5119371 - 5120327 | 33937.2 |
| cytosine/adenosine deaminase-related metal-dependent hydrolase | B0O44_109218 | Not Available | Negative | 5120333 - 5121502 | 43142.9 |
| hth domain-containing protein | B0O44_109219 | Not Available | Positive | 5121651 - 5122340 | 27013.7 |
| asma protein | B0O44_109220 | Not Available | Negative | 5122560 - 5125565 | 111153.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

