Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_109201 | Not Available | Negative | 5099062 - 5099211 | 5260.8 |
| hypothetical protein | B0O44_109202 | Not Available | Negative | 5099195 - 5099602 | 15703.6 |
| glycine cleavage system h protein | B0O44_109203 | Not Available | Negative | 5099606 - 5099986 | 13705.0 |
| cell surface protein spra | B0O44_109204 | Not Available | Negative | 5100041 - 5107198 | 269501.0 |
| holliday junction dna helicase subunit ruva | B0O44_109205 | Not Available | Negative | 5107250 - 5107834 | 21248.0 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | B0O44_109206 | Not Available | Negative | 5107838 - 5110153 | 84591.8 |
| membrane-bound lytic murein transglycosylase d | B0O44_109207 | Not Available | Negative | 5110216 - 5111490 | 48118.1 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | B0O44_109208 | Not Available | Negative | 5111582 - 5113006 | 51228.3 |
| sec-independent protein translocase protein tata | B0O44_109209 | Not Available | Negative | 5113040 - 5113249 | 7482.17 |
| tata/e family protein of tat protein translocase | B0O44_109210 | Not Available | Negative | 5113260 - 5113628 | 13395.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

