Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase protein tatc | B0O44_109191 | Not Available | Positive | 5085629 - 5086516 | 33603.9 |
| ribose 5-phosphate isomerase b | B0O44_109192 | Not Available | Positive | 5086562 - 5086996 | 15659.6 |
| peptidase m28-like protein | B0O44_109193 | Not Available | Positive | 5087036 - 5088658 | 59590.1 |
| l-lactate dehydrogenase complex protein lldf | B0O44_109194 | Not Available | Positive | 5088875 - 5090257 | 52209.8 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase e1 component | B0O44_109195 | Not Available | Positive | 5090292 - 5092268 | 73566.2 |
| hypothetical protein | B0O44_109196 | Not Available | Positive | 5092325 - 5093137 | 30479.3 |
| sprt-like family protein | B0O44_109197 | Not Available | Negative | 5093086 - 5093670 | 22412.0 |
| ferrous iron transport protein b | B0O44_109198 | Not Available | Negative | 5093719 - 5095836 | 77712.0 |
| ferrous iron transport protein a | B0O44_109199 | Not Available | Negative | 5095840 - 5096055 | 7812.76 |
| outer membrane receptor protein involved in fe transport | B0O44_109200 | Not Available | Negative | 5096118 - 5098922 | 103050.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

