Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase n | B0O44_109181 | Not Available | Positive | 5075771 - 5077651 | 71251.8 |
| d-3-phosphoglycerate dehydrogenase | B0O44_109182 | Not Available | Negative | 5077694 - 5078617 | 33997.0 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | B0O44_109183 | Not Available | Negative | 5078620 - 5079411 | 29923.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | B0O44_109184 | Not Available | Positive | 5079628 - 5080707 | 39241.2 |
| uncharacterized metal-binding protein yced (duf177 family) | B0O44_109185 | Not Available | Positive | 5080763 - 5081320 | 21157.6 |
| large subunit ribosomal protein l32 | B0O44_109186 | Not Available | Positive | 5081339 - 5081530 | 7108.49 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | B0O44_109187 | Not Available | Positive | 5081631 - 5082569 | 33453.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | B0O44_109188 | Not Available | Positive | 5082581 - 5083570 | 35811.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | B0O44_109189 | Not Available | Positive | 5083639 - 5084127 | 17380.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | B0O44_109190 | Not Available | Positive | 5084164 - 5085504 | 49603.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

