Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 5052504 - 5052579 | Not Available |
| gtp-binding protein era | B0O44_109161 | Not Available | Positive | 5052689 - 5053567 | 33453.3 |
| gtp-binding protein | B0O44_109162 | Not Available | Positive | 5053679 - 5054980 | 48971.1 |
| carboxyl-terminal processing protease | B0O44_109163 | Not Available | Negative | 5054994 - 5056601 | 59651.8 |
| n-acetylmuramic acid 6-phosphate etherase | B0O44_109164 | Not Available | Positive | 5056813 - 5057622 | 29057.8 |
| hypothetical protein | B0O44_109165 | Not Available | Positive | 5057626 - 5058195 | 22608.4 |
| hypothetical protein | B0O44_109166 | Not Available | Positive | 5058247 - 5059011 | 27205.8 |
| methionine synthase (b12-dependent) | B0O44_109168 | Not Available | Positive | 5059615 - 5063274 | 135561.0 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | B0O44_109169 | Not Available | Positive | 5063329 - 5064285 | 35838.2 |
| heat shock protein hslj | B0O44_109170 | Not Available | Positive | 5064354 - 5064791 | 15722.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

