Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wbqc-like protein | B0O44_101429 | Not Available | Positive | 526913 - 527524 | 24373.0 |
| magnesium transporter | B0O44_101430 | Not Available | Positive | 527573 - 528646 | 41552.3 |
| mg2+ transporter mgte | B0O44_101431 | Not Available | Positive | 528690 - 530039 | 50148.4 |
| ohr subfamily peroxiredoxin | B0O44_101432 | Not Available | Negative | 530088 - 530498 | 14466.2 |
| putative membrane protein (tigr01666 family) | B0O44_101433 | Not Available | Negative | 530541 - 532697 | 81891.5 |
| hypothetical protein | B0O44_101434 | Not Available | Positive | 532836 - 533549 | 27845.1 |
| hypothetical protein | B0O44_101435 | Not Available | Negative | 533621 - 534763 | 42805.1 |
| tetratricopeptide repeat protein | B0O44_101436 | Not Available | Negative | 534885 - 535967 | 40019.9 |
| dna gyrase subunit a | B0O44_101437 | Not Available | Negative | 536079 - 538655 | 96311.0 |
| coproporphyrinogen oxidase | B0O44_101438 | Not Available | Negative | 538751 - 539647 | 34763.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

