Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative had superfamily cof-like phosphohydrolase | B0O44_109140 | Not Available | Negative | 5034339 - 5034806 | 17626.8 |
| Trna-thr | Not Available | Not Available | Positive | 5034989 - 5035061 | Not Available |
| dna-binding response ompr family regulator | B0O44_109142 | Not Available | Negative | 5035079 - 5035780 | 26418.3 |
| signal transduction histidine kinase | B0O44_109143 | Not Available | Negative | 5035777 - 5037234 | 56104.2 |
| carboxypeptidase-like protein | B0O44_109144 | Not Available | Positive | 5037331 - 5039754 | 91595.3 |
| hypothetical protein | B0O44_109145 | Not Available | Negative | 5039886 - 5040299 | 15166.3 |
| hypothetical protein | B0O44_109146 | Not Available | Negative | 5040339 - 5040767 | 15224.8 |
| putative iron-regulated membrane protein | B0O44_109147 | Not Available | Negative | 5040954 - 5042126 | 45319.3 |
| iron complex outermembrane receptor protein | B0O44_109148 | Not Available | Negative | 5042195 - 5044603 | 88309.8 |
| arac-like dna-binding protein | B0O44_109149 | Not Available | Positive | 5044784 - 5045743 | 37256.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

