Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_109130 | Not Available | Negative | 5016396 - 5016644 | 9412.08 |
| dna-binding response ompr family regulator | B0O44_109131 | Not Available | Positive | 5016788 - 5020897 | 155991.0 |
| hypothetical protein | B0O44_109132 | Not Available | Positive | 5020980 - 5023454 | 93803.7 |
| tonb-linked susc/raga family outer membrane protein | B0O44_109133 | Not Available | Positive | 5023497 - 5026577 | 114154.0 |
| putative outer membrane starch-binding protein | B0O44_109134 | Not Available | Positive | 5026580 - 5028091 | 56200.3 |
| putative gh43/duf377 family glycosyl hydrolase | B0O44_109135 | Not Available | Positive | 5028110 - 5029171 | 39589.2 |
| yqge family putative transporter | B0O44_109136 | Not Available | Positive | 5029161 - 5030450 | 47718.7 |
| hypothetical protein | B0O44_109137 | Not Available | Positive | 5030460 - 5032184 | 64400.4 |
| putative ntn-hydrolase superfamily protein | B0O44_109138 | Not Available | Negative | 5032217 - 5033434 | 45380.5 |
| thiol-disulfide isomerase/thioredoxin | B0O44_109139 | Not Available | Positive | 5033521 - 5034294 | 29568.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

