Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_109120 | Not Available | Negative | 5008304 - 5009251 | 35516.4 |
| luciferase family oxidoreductase group 1 | B0O44_109121 | Not Available | Positive | 5009446 - 5010456 | 36929.3 |
| hypothetical protein | B0O44_109122 | Not Available | Negative | 5010457 - 5010984 | 19684.0 |
| two-component system response regulator glrr | B0O44_109123 | Not Available | Negative | 5011165 - 5011560 | 15251.9 |
| hypothetical protein | B0O44_109124 | Not Available | Positive | 5011629 - 5011823 | 7584.27 |
| pas domain s-box-containing protein | B0O44_109125 | Not Available | Negative | 5011834 - 5012742 | 35169.1 |
| subtilase family protein | B0O44_109126 | Not Available | Negative | 5012923 - 5014518 | 58545.1 |
| uroporphyrin-iii c-methyltransferase | B0O44_109127 | Not Available | Negative | 5014732 - 5015523 | 28166.1 |
| hypothetical protein | B0O44_109128 | Not Available | Positive | 5015651 - 5015839 | 7245.87 |
| badm/rrf2 family transcriptional regulator | B0O44_109129 | Not Available | Negative | 5015914 - 5016351 | 16239.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

