Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metalloprotease with pdz domain | B0O44_109110 | Not Available | Negative | 4981451 - 4983238 | 65873.8 |
| membrane fusion protein (multidrug efflux system) | B0O44_109111 | Not Available | Positive | 4983439 - 4984539 | 38811.2 |
| multidrug efflux pump | B0O44_109112 | Not Available | Positive | 4984549 - 4987662 | 114078.0 |
| outer membrane protein tolc | B0O44_109113 | Not Available | Positive | 4987649 - 4988962 | 48704.2 |
| n-acetylglucosamine kinase-like badf-type atpase | B0O44_109114 | Not Available | Positive | 4988981 - 4989835 | 31882.9 |
| hypothetical protein | B0O44_109115 | Not Available | Negative | 4989861 - 4992425 | 99892.2 |
| gliding motility-associated-like protein | B0O44_109116 | Not Available | Positive | 4992708 - 5003438 | 365357.0 |
| type ix secretion system porp/sprf family membrane protein | B0O44_109117 | Not Available | Positive | 5003466 - 5004461 | 35979.9 |
| wd40 repeat protein | B0O44_109118 | Not Available | Positive | 5004484 - 5006478 | 74889.0 |
| signal transduction histidine kinase | B0O44_109119 | Not Available | Negative | 5006485 - 5008245 | 66146.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

