Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylation response protein aidb-like acyl-coa dehydrogenase | B0O44_109100 | Not Available | Negative | 4966238 - 4968028 | 65607.0 |
| acetyl-coa acyltransferase | B0O44_109101 | Not Available | Negative | 4968087 - 4969265 | 41920.8 |
| 3-hydroxyacyl-coa dehydrogenase | B0O44_109102 | Not Available | Negative | 4969291 - 4971657 | 87239.2 |
| dna-binding marr family transcriptional regulator | B0O44_109103 | Not Available | Negative | 4971632 - 4972090 | 17145.7 |
| oop family ompa-ompf porin | B0O44_109104 | Not Available | Negative | 4972220 - 4973548 | 47267.1 |
| gamma-glutamyltranspeptidase/glutathione hydrolase | B0O44_109105 | Not Available | Negative | 4973630 - 4975345 | 61558.9 |
| long-chain acyl-coa synthetase | B0O44_109106 | Not Available | Negative | 4975323 - 4977095 | 66493.5 |
| uncharacterized protein (duf1501 family) | B0O44_109107 | Not Available | Negative | 4977141 - 4978418 | 45646.1 |
| uncharacterized protein (duf1800 family) | B0O44_109108 | Not Available | Negative | 4978442 - 4980385 | 71061.7 |
| hypothetical protein | B0O44_109109 | Not Available | Positive | 4980665 - 4981144 | 17360.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

