Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative autotransporter adhesin-like protein | B0O44_10990 | Not Available | Positive | 4953886 - 4954614 | 25384.4 |
| hypothetical protein | B0O44_10991 | Not Available | Negative | 4954679 - 4955569 | 34282.7 |
| 2-oxoglutarate dehydrogenase e2 component | B0O44_10992 | Not Available | Negative | 4955695 - 4956930 | 43887.0 |
| 2-oxoglutarate dehydrogenase e1 component | B0O44_10993 | Not Available | Negative | 4956949 - 4959744 | 105556.0 |
| b12 binding protein | B0O44_10994 | Not Available | Negative | 4959810 - 4960688 | 33637.4 |
| deoxyribodipyrimidine photo-lyase | B0O44_10995 | Not Available | Negative | 4960818 - 4962095 | 48960.6 |
| hypothetical protein | B0O44_10996 | Not Available | Positive | 4962360 - 4963268 | 33857.3 |
| deoxyribodipyrimidine photo-lyase | B0O44_10997 | Not Available | Positive | 4963308 - 4964615 | 51760.0 |
| fkbp-type peptidyl-prolyl isomerase-like protein | B0O44_10998 | Not Available | Negative | 4964624 - 4965586 | 33949.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | B0O44_10999 | Not Available | Negative | 4965598 - 4966122 | 19376.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

