Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | B0O44_10960 | Not Available | Positive | 4916981 - 4918297 | 48312.0 |
| hypothetical protein | B0O44_10961 | Not Available | Negative | 4918351 - 4919346 | 36856.8 |
| pyridoxine 5-phosphate synthase | B0O44_10962 | Not Available | Positive | 4919371 - 4920090 | 26592.8 |
| hypothetical protein | B0O44_10963 | Not Available | Positive | 4920106 - 4920678 | 21406.1 |
| glycine dehydrogenase (decarboxylating) | B0O44_10964 | Not Available | Positive | 4920760 - 4923639 | 105216.0 |
| polyisoprenoid-binding protein ycei | B0O44_10965 | Not Available | Positive | 4923668 - 4924258 | 20989.1 |
| chey-like chemotaxis protein | B0O44_10966 | Not Available | Positive | 4924387 - 4924791 | 15505.0 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | B0O44_10967 | Not Available | Negative | 4924788 - 4925558 | 29259.5 |
| single-stranded-dna-specific exonuclease | B0O44_10968 | Not Available | Positive | 4925736 - 4927439 | 63293.9 |
| lipopolysaccharide export system atp-binding protein | B0O44_10969 | Not Available | Positive | 4927448 - 4928182 | 27452.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

