Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101419 | Not Available | Negative | 518833 - 519147 | 11412.1 |
| uridine phosphorylase | B0O44_101420 | Not Available | Negative | 519270 - 520136 | 31634.0 |
| putative yigz family protein | B0O44_101421 | Not Available | Negative | 520191 - 520805 | 23392.2 |
| eama-like transporter family protein | B0O44_101422 | Not Available | Negative | 520795 - 521658 | 32083.0 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | B0O44_101423 | Not Available | Negative | 521655 - 522692 | 38859.0 |
| release factor glutamine methyltransferase | B0O44_101424 | Not Available | Positive | 522759 - 523601 | 31901.6 |
| integrase/recombinase xerd | B0O44_101425 | Not Available | Negative | 523602 - 524501 | 34092.9 |
| 3-dehydroquinate dehydratase | B0O44_101426 | Not Available | Positive | 524534 - 524968 | 16184.7 |
| hypothetical protein | B0O44_101427 | Not Available | Negative | 524965 - 525999 | 39679.8 |
| kdo2-lipid iv(a) lauroyltransferase | B0O44_101428 | Not Available | Negative | 525996 - 526874 | 34797.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

