Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase-like flavoprotein | B0O44_10930 | Not Available | Positive | 4884863 - 4886566 | 64103.7 |
| putative dehydrogenase | B0O44_10931 | Not Available | Positive | 4886566 - 4887726 | 42719.2 |
| sugar phosphate isomerase/epimerase | B0O44_10932 | Not Available | Positive | 4887730 - 4888785 | 39383.5 |
| cytochrome c | B0O44_10933 | Not Available | Positive | 4888888 - 4889292 | 13984.8 |
| oxidoreductase family protein | B0O44_10934 | Not Available | Positive | 4889313 - 4890770 | 53995.2 |
| uncharacterized protein duf1080 | B0O44_10935 | Not Available | Positive | 4890792 - 4891487 | 25939.7 |
| nucleoside transporter | B0O44_10936 | Not Available | Positive | 4891546 - 4892748 | 44283.9 |
| hydroxypyruvate isomerase | B0O44_10937 | Not Available | Positive | 4892758 - 4893642 | 32717.3 |
| sugar phosphate isomerase/epimerase | B0O44_10938 | Not Available | Positive | 4893647 - 4894528 | 33045.7 |
| aspartate-semialdehyde dehydrogenase | B0O44_10939 | Not Available | Positive | 4894619 - 4895611 | 36391.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

