Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase | B0O44_108312 | Not Available | Positive | 4849161 - 4850231 | 39834.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | B0O44_1091 | Not Available | Positive | 4850670 - 4851887 | 46449.4 |
| ferrochelatase | B0O44_1092 | Not Available | Negative | 4851884 - 4852897 | 38232.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | B0O44_1093 | Not Available | Negative | 4853008 - 4853874 | 32886.1 |
| hypothetical protein | B0O44_1094 | Not Available | Negative | 4853971 - 4854594 | 24286.3 |
| pyrimidine operon attenuation protein/uracil phosphoribosyltransferase | B0O44_1095 | Not Available | Negative | 4854633 - 4855142 | 19090.5 |
| putative autotransporter adhesin-like protein | B0O44_1096 | Not Available | Positive | 4855272 - 4855985 | 25314.9 |
| hypothetical protein | B0O44_1097 | Not Available | Negative | 4856106 - 4856510 | 15637.8 |
| 23s rrna (uracil1939-c5)-methyltransferase | B0O44_1098 | Not Available | Negative | 4856517 - 4857929 | 53165.9 |
| tetr family transcriptional regulator | B0O44_1099 | Not Available | Negative | 4858286 - 4858861 | 22093.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

