Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette subfamily b protein | B0O44_108302 | Not Available | Positive | 4836194 - 4837963 | 66733.9 |
| succinyl-coa synthetase alpha subunit | B0O44_108303 | Not Available | Positive | 4838026 - 4838961 | 32533.8 |
| Trna-leu | Not Available | Not Available | Positive | 4839078 - 4839161 | Not Available |
| peptide-methionine (r)-s-oxide reductase/peptide methionine sulfoxide reductase msra/msrb | B0O44_108305 | Not Available | Positive | 4839303 - 4839788 | 18090.7 |
| rare lipoprotein a | B0O44_108306 | Not Available | Positive | 4840043 - 4840432 | 14535.6 |
| ribonucleoside-diphosphate reductase beta chain | B0O44_108307 | Not Available | Positive | 4840821 - 4841795 | 37561.9 |
| ribonucleoside-diphosphate reductase alpha chain | B0O44_108308 | Not Available | Positive | 4841905 - 4844283 | 89287.5 |
| alpha-tubulin suppressor-like rcc1 family protein | B0O44_108309 | Not Available | Positive | 4844369 - 4845568 | 42915.4 |
| putative membrane protein yqik | B0O44_108310 | Not Available | Positive | 4846249 - 4848204 | 71408.3 |
| n-carbamoylputrescine amidase | B0O44_108311 | Not Available | Positive | 4848302 - 4849177 | 32888.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

