Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitase | B0O44_108292 | Not Available | Negative | 4822451 - 4824727 | 82065.6 |
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | B0O44_108293 | Not Available | Negative | 4825015 - 4825632 | 23850.0 |
| outer membrane protein | B0O44_108294 | Not Available | Positive | 4825716 - 4827092 | 50835.5 |
| hlyd family secretion protein | B0O44_108295 | Not Available | Positive | 4827131 - 4828504 | 49009.5 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | B0O44_108296 | Not Available | Positive | 4828597 - 4829577 | 36495.1 |
| hypothetical protein | B0O44_108297 | Not Available | Positive | 4829624 - 4829947 | 11722.3 |
| iron complex outermembrane receptor protein | B0O44_108298 | Not Available | Positive | 4830080 - 4832857 | 99925.7 |
| atp-dependent rna helicase dead | B0O44_108299 | Not Available | Negative | 4832939 - 4834789 | 68437.9 |
| uncharacterized protein duf4293 | B0O44_108300 | Not Available | Negative | 4834879 - 4835343 | 17129.8 |
| trna pseudouridine(38-40) synthase | B0O44_108301 | Not Available | Positive | 4835438 - 4836190 | 28452.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

