Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide kinase | B0O44_108282 | Not Available | Positive | 4811874 - 4812920 | 40253.3 |
| purine-nucleoside phosphorylase | B0O44_108283 | Not Available | Positive | 4812880 - 4813695 | 30061.6 |
| putative beta-barrel porin | B0O44_108284 | Not Available | Positive | 4813695 - 4815686 | 76033.9 |
| hypothetical protein | B0O44_108285 | Not Available | Negative | 4815709 - 4816971 | 47553.7 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | B0O44_108286 | Not Available | Positive | 4817070 - 4817531 | 16800.8 |
| hypothetical protein | B0O44_108287 | Not Available | Positive | 4817563 - 4818102 | 19432.3 |
| hypothetical protein | B0O44_108288 | Not Available | Negative | 4818179 - 4818304 | 4713.87 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | B0O44_108289 | Not Available | Negative | 4818365 - 4818838 | 18152.2 |
| muts-like protein | B0O44_108290 | Not Available | Positive | 4818871 - 4820766 | 72454.3 |
| beta-glucosidase | B0O44_108291 | Not Available | Positive | 4820928 - 4822262 | 50476.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

