Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system phosphate regulon response regulator phob | B0O44_101409 | Not Available | Positive | 502965 - 503330 | 13994.1 |
| rna recognition motif-containing protein | B0O44_101410 | Not Available | Positive | 503498 - 503803 | 11154.1 |
| putative membrane protein yhhn | B0O44_101411 | Not Available | Positive | 503904 - 504587 | 26060.3 |
| penicillin-binding protein 1c | B0O44_101412 | Not Available | Negative | 504544 - 506946 | 90555.6 |
| hypothetical protein | B0O44_101413 | Not Available | Negative | 506948 - 512533 | 207252.0 |
| hypothetical protein | B0O44_101414 | Not Available | Negative | 512588 - 512992 | 15231.6 |
| dna topoisomerase-1 | B0O44_101415 | Not Available | Negative | 512993 - 515563 | 96960.5 |
| glutathione peroxidase | B0O44_101416 | Not Available | Positive | 515885 - 516394 | 19090.2 |
| pp_00413 | B0O44_101417 | Not Available | Negative | 516462 - 517553 | Not Available |
| rna polymerase rpos-like sigma 38 subunit | B0O44_101418 | Not Available | Positive | 517923 - 518771 | 32548.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

