Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | B0O44_108262 | Not Available | Positive | 4791361 - 4791579 | 8308.24 |
| ssu ribosomal protein s13p | B0O44_108263 | Not Available | Positive | 4791780 - 4792157 | 14146.3 |
| small subunit ribosomal protein s11 | B0O44_108264 | Not Available | Positive | 4792176 - 4792565 | 13786.8 |
| small subunit ribosomal protein s4 | B0O44_108265 | Not Available | Positive | 4792631 - 4793239 | 23054.7 |
| dna-directed rna polymerase subunit alpha | B0O44_108266 | Not Available | Positive | 4793318 - 4794310 | 37121.9 |
| large subunit ribosomal protein l17 | B0O44_108267 | Not Available | Positive | 4794395 - 4794943 | 20272.2 |
| 2'-5' rna ligase | B0O44_108268 | Not Available | Negative | 4794997 - 4795551 | 21441.1 |
| methyltransferase family protein | B0O44_108269 | Not Available | Positive | 4795609 - 4796802 | 45163.9 |
| molecular chaperone dnak | B0O44_108270 | Not Available | Positive | 4796959 - 4798881 | 68877.5 |
| nucleotidyltransferase-like protein | B0O44_108271 | Not Available | Negative | 4798942 - 4799841 | 34234.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

