Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein methyltransferase cher | B0O44_108222 | Not Available | Negative | 4762207 - 4763043 | 32408.8 |
| signal transduction histidine kinase | B0O44_108223 | Not Available | Negative | 4763045 - 4766518 | 129916.0 |
| spx/mgsr family transcriptional regulator | B0O44_108224 | Not Available | Positive | 4766682 - 4767035 | 13453.2 |
| hypothetical protein | B0O44_108225 | Not Available | Positive | 4767099 - 4767836 | 27366.5 |
| aminopeptidase n | B0O44_108226 | Not Available | Positive | 4767929 - 4769911 | 74642.4 |
| miniconductance mechanosensitive channel | B0O44_108227 | Not Available | Negative | 4769918 - 4771231 | 49688.3 |
| hypothetical protein | B0O44_108228 | Not Available | Negative | 4771297 - 4771935 | 23751.3 |
| uncharacterized protein duf2132 | B0O44_108229 | Not Available | Positive | 4771972 - 4772196 | 8924.82 |
| 2-methylisocitrate lyase-like pep mutase family enzyme | B0O44_108230 | Not Available | Positive | 4772202 - 4773044 | 29702.7 |
| hypothetical protein | B0O44_108231 | Not Available | Positive | 4773127 - 4773444 | 11962.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

