Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | B0O44_108212 | Not Available | Positive | 4749998 - 4751890 | 70522.9 |
| hypothetical protein | B0O44_108213 | Not Available | Negative | 4751918 - 4752121 | 7402.97 |
| carboxypeptidase c (cathepsin a) | B0O44_108214 | Not Available | Positive | 4752165 - 4753718 | 57935.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | B0O44_108215 | Not Available | Positive | 4753770 - 4754732 | 36043.6 |
| uncharacterized protein duf2723 | B0O44_108216 | Not Available | Negative | 4754814 - 4757846 | 114140.0 |
| Trna-gln | Not Available | Not Available | Positive | 4758145 - 4758218 | Not Available |
| ribose-phosphate pyrophosphokinase | B0O44_108218 | Not Available | Positive | 4758285 - 4759226 | 34116.4 |
| large subunit ribosomal protein l25 | B0O44_108219 | Not Available | Positive | 4759283 - 4759861 | 21149.0 |
| pth1 family peptidyl-trna hydrolase | B0O44_108220 | Not Available | Positive | 4760002 - 4760562 | 20774.3 |
| signal transduction histidine kinase | B0O44_108221 | Not Available | Negative | 4760584 - 4762191 | 59936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

