Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd dnase family protein | B0O44_108192 | Not Available | Positive | 4724402 - 4725169 | 29064.2 |
| l-asparaginase | B0O44_108193 | Not Available | Positive | 4725176 - 4726192 | 37386.2 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | B0O44_108194 | Not Available | Positive | 4726273 - 4727688 | 51380.8 |
| thioredoxin reductase (nadph) | B0O44_108195 | Not Available | Positive | 4727696 - 4728661 | 36105.3 |
| octaprenyl-diphosphate synthase | B0O44_108196 | Not Available | Positive | 4728694 - 4729665 | 36454.2 |
| pa domain-containing protein | B0O44_108197 | Not Available | Positive | 4729783 - 4731237 | 52112.6 |
| hypothetical protein | B0O44_108198 | Not Available | Positive | 4731332 - 4731634 | 11654.1 |
| hypothetical protein | B0O44_108199 | Not Available | Positive | 4731693 - 4732151 | 17439.1 |
| hypothetical protein | B0O44_108200 | Not Available | Positive | 4732505 - 4733146 | 23666.8 |
| laci family transcriptional regulator | B0O44_108201 | Not Available | Positive | 4733233 - 4734249 | 38316.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

