Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol system protein ytxj | B0O44_108182 | Not Available | Negative | 4717218 - 4717550 | 12645.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | B0O44_108183 | Not Available | Negative | 4717762 - 4718253 | 17152.5 |
| tetratricopeptide repeat protein | B0O44_108184 | Not Available | Negative | 4718331 - 4718999 | 24512.1 |
| dna replication and repair protein recf | B0O44_108185 | Not Available | Positive | 4719115 - 4720230 | 43306.5 |
| uncharacterized protein duf721 | B0O44_108186 | Not Available | Positive | 4720223 - 4720513 | 10951.7 |
| hypothetical protein | B0O44_108187 | Not Available | Negative | 4720510 - 4720692 | 6398.36 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | B0O44_108188 | Not Available | Negative | 4720742 - 4721506 | 27555.6 |
| nucleoside diphosphate kinase | B0O44_108189 | Not Available | Negative | 4721620 - 4722039 | 15307.0 |
| phosphoesterase recj-like protein | B0O44_108190 | Not Available | Positive | 4722158 - 4723168 | 37719.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | B0O44_108191 | Not Available | Positive | 4723315 - 4724331 | 36847.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

