Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_108162 | Not Available | Positive | 4694690 - 4695547 | 31862.6 |
| glycerophosphoryl diester phosphodiesterase | B0O44_108163 | Not Available | Positive | 4695639 - 4696511 | 33286.1 |
| moxr-like atpase | B0O44_108164 | Not Available | Negative | 4696503 - 4697465 | 35305.6 |
| periplasmic chaperone for outer membrane proteins sura | B0O44_108165 | Not Available | Negative | 4697471 - 4698826 | 51817.3 |
| hypothetical protein | B0O44_108166 | Not Available | Positive | 4699056 - 4699637 | 21505.6 |
| xtp/ditp diphosphohydrolase | B0O44_108167 | Not Available | Positive | 4699634 - 4700215 | 21794.9 |
| osta-like protein | B0O44_108168 | Not Available | Negative | 4700187 - 4702421 | 83900.5 |
| trna(ile)-lysidine synthase | B0O44_108169 | Not Available | Positive | 4702551 - 4703888 | 51093.6 |
| hypothetical protein | B0O44_108170 | Not Available | Positive | 4703956 - 4704441 | 18917.2 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | B0O44_108171 | Not Available | Positive | 4704612 - 4705757 | 42611.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

