Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid transport protein | B0O44_108152 | Not Available | Positive | 4682018 - 4683232 | 43435.7 |
| hypothetical protein | B0O44_108153 | Not Available | Positive | 4683250 - 4684542 | 45146.6 |
| peptide-methionine (s)-s-oxide reductase | B0O44_108154 | Not Available | Negative | 4684604 - 4685209 | 23019.2 |
| isopenicillin n synthase-like dioxygenase | B0O44_108155 | Not Available | Positive | 4685529 - 4686491 | 36116.6 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_108156 | Not Available | Negative | 4686559 - 4688394 | 67273.4 |
| dna mismatch repair protein mutl | B0O44_108157 | Not Available | Positive | 4688549 - 4690399 | 68889.2 |
| rhomboid-like protein | B0O44_108158 | Not Available | Positive | 4690402 - 4691136 | 27600.0 |
| membrane associated rhomboid family serine protease | B0O44_108159 | Not Available | Positive | 4691129 - 4691992 | 32171.7 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | B0O44_108160 | Not Available | Positive | 4691992 - 4693101 | 42194.9 |
| cysteinyl-trna synthetase | B0O44_108161 | Not Available | Positive | 4693152 - 4694615 | 55157.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

