Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | B0O44_108102 | Not Available | Positive | 4624799 - 4625713 | 34905.4 |
| transaldolase | B0O44_108103 | Not Available | Positive | 4625816 - 4626973 | 43993.8 |
| outer membrane protein tolc | B0O44_108104 | Not Available | Positive | 4627193 - 4628542 | 51374.8 |
| membrane fusion protein (multidrug efflux system) | B0O44_108105 | Not Available | Positive | 4628551 - 4629711 | 40918.1 |
| hae1 family hydrophobic/amphiphilic exporter-1 | B0O44_108106 | Not Available | Positive | 4629734 - 4632913 | 114289.0 |
| hypothetical protein | B0O44_108107 | Not Available | Negative | 4632987 - 4633301 | 11637.7 |
| hypothetical protein | B0O44_108108 | Not Available | Negative | 4633424 - 4634131 | 26235.8 |
| signal peptidase ii | B0O44_108109 | Not Available | Negative | 4634221 - 4634823 | 22664.1 |
| trar/dksa family transcriptional regulator | B0O44_108110 | Not Available | Negative | 4634823 - 4635206 | 14426.2 |
| isoleucyl-trna synthetase | B0O44_108111 | Not Available | Negative | 4635233 - 4638634 | 129333.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

