Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nte family protein | B0O44_10892 | Not Available | Negative | 4614535 - 4615323 | 28543.2 |
| gliding motility-associated lipoprotein gldb | B0O44_10893 | Not Available | Negative | 4615333 - 4616469 | 43756.6 |
| outer membrane protein with beta-barrel domain | B0O44_10894 | Not Available | Positive | 4616623 - 4617291 | 24105.8 |
| nad+ synthase (glutamine-hydrolysing) | B0O44_10895 | Not Available | Positive | 4617297 - 4618937 | 60362.8 |
| hypothetical protein | B0O44_10896 | Not Available | Negative | 4618938 - 4619570 | 23888.3 |
| apolipoprotein n-acyltransferase | B0O44_10897 | Not Available | Negative | 4619578 - 4621206 | 61029.9 |
| putative oligomerization/nucleic acid binding protein | B0O44_10898 | Not Available | Negative | 4621215 - 4621874 | 24723.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | B0O44_10899 | Not Available | Negative | 4621881 - 4622597 | 26769.2 |
| seryl-trna synthetase | B0O44_108100 | Not Available | Positive | 4622692 - 4623963 | 47778.2 |
| tetr family transcriptional regulator | B0O44_108101 | Not Available | Negative | 4624011 - 4624610 | 23424.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

