Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_10882 | Not Available | Positive | 4605575 - 4605790 | 7786.89 |
| uncharacterized protein duf4349 | B0O44_10883 | Not Available | Positive | 4605890 - 4606771 | 33823.0 |
| holliday junction endonuclease ruvc | B0O44_10884 | Not Available | Negative | 4606801 - 4607370 | 20811.6 |
| hypothetical protein | B0O44_10885 | Not Available | Positive | 4607413 - 4608390 | 37994.9 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | B0O44_10886 | Not Available | Positive | 4608368 - 4609498 | 42528.0 |
| peptide/nickel transport system permease protein | B0O44_10887 | Not Available | Positive | 4609498 - 4610589 | 39817.4 |
| rnase hii | B0O44_10888 | Not Available | Positive | 4610619 - 4611230 | 22653.3 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_10889 | Not Available | Positive | 4611484 - 4612686 | 46783.2 |
| aminomethyltransferase | B0O44_10890 | Not Available | Positive | 4612727 - 4613806 | 39664.3 |
| 2-phosphosulfolactate phosphatase | B0O44_10891 | Not Available | Positive | 4613821 - 4614531 | 26021.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

