Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane receptor protein | B0O44_10128 | Not Available | Positive | 41557 - 43980 | 89442.8 |
| tonb-linked susc/raga family outer membrane protein | B0O44_10129 | Not Available | Positive | 44229 - 47252 | 111505.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_10130 | Not Available | Positive | 47271 - 48761 | 56770.4 |
| hypothetical protein | B0O44_10131 | Not Available | Positive | 48773 - 49552 | 28590.2 |
| pkd domain-containing protein | B0O44_10132 | Not Available | Positive | 49561 - 51162 | 57438.2 |
| gh18 family chitinase | B0O44_10133 | Not Available | Positive | 51172 - 52203 | 37984.7 |
| putative repeat protein (tigr01451 family)/gliding motility-associated-like protein | B0O44_10134 | Not Available | Positive | 52785 - 67874 | 501927.0 |
| type ix secretion system porp/sprf family membrane protein | B0O44_10135 | Not Available | Positive | 67879 - 68907 | 38244.5 |
| wd40 repeat protein | B0O44_10136 | Not Available | Positive | 68923 - 70926 | 74171.2 |
| hypothetical protein | B0O44_10137 | Not Available | Positive | 71092 - 71637 | 18707.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

