Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase family protein | B0O44_10862 | Not Available | Positive | 4578141 - 4581377 | 119009.0 |
| snf2 family dna or rna helicase | B0O44_10863 | Not Available | Positive | 4581476 - 4584823 | 129254.0 |
| uncharacterized protein duf4271 | B0O44_10864 | Not Available | Positive | 4584904 - 4585848 | 36264.6 |
| uroporphyrinogen-iii synthase | B0O44_10865 | Not Available | Positive | 4585864 - 4586634 | 29422.3 |
| gliding motility-associated lipoprotein gldk | B0O44_10866 | Not Available | Positive | 4586729 - 4588096 | 51185.2 |
| gliding motility-associated protein gldl | B0O44_10867 | Not Available | Positive | 4588145 - 4588954 | 28802.2 |
| gliding motility-associated protein gldm | B0O44_10868 | Not Available | Positive | 4589039 - 4590544 | 53852.9 |
| gliding motility associated protein gldn | B0O44_10869 | Not Available | Positive | 4590558 - 4591529 | 36625.8 |
| excinuclease abc subunit c | B0O44_10870 | Not Available | Negative | 4591916 - 4593718 | 69265.8 |
| penicillin-binding protein 1a | B0O44_10871 | Not Available | Negative | 4593742 - 4595964 | 83443.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

