Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin dioxygenase-like cupin family protein | B0O44_10852 | Not Available | Negative | 4562452 - 4562859 | 15115.3 |
| hypothetical protein | B0O44_10853 | Not Available | Negative | 4563000 - 4563203 | 7667.09 |
| hypothetical protein | B0O44_10854 | Not Available | Negative | 4563407 - 4563607 | 7977.59 |
| hypothetical protein | B0O44_10855 | Not Available | Negative | 4564675 - 4565022 | 13152.3 |
| alginate lyase | B0O44_10856 | Not Available | Negative | 4565426 - 4566535 | 41987.6 |
| uncharacterized protein duf5017 | B0O44_10857 | Not Available | Negative | 4566540 - 4567436 | 32162.9 |
| susd-like starch-binding protein associating with outer membrane | B0O44_10858 | Not Available | Negative | 4567454 - 4569025 | 59077.9 |
| tonb-linked susc/raga family outer membrane protein | B0O44_10859 | Not Available | Negative | 4569054 - 4572266 | 117332.0 |
| signal transduction histidine kinase | B0O44_10860 | Not Available | Negative | 4572388 - 4576530 | 156105.0 |
| hypothetical protein | B0O44_10861 | Not Available | Negative | 4576767 - 4577603 | 31827.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

