Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease noti | B0O44_10812 | Not Available | Positive | 4523744 - 4524628 | 33226.6 |
| site-specific dna-adenine methylase | B0O44_10813 | Not Available | Positive | 4524643 - 4525518 | 33627.3 |
| hypothetical protein | B0O44_10814 | Not Available | Negative | 4525723 - 4526070 | 13098.2 |
| d-isomer specific 2-hydroxyacid dehydrogenase-like protein | B0O44_10815 | Not Available | Positive | 4526409 - 4526858 | 16446.1 |
| oxygen-independent coproporphyrinogen-3 oxidase | B0O44_10816 | Not Available | Positive | 4526917 - 4528272 | 51672.2 |
| crp-like camp-binding protein | B0O44_10817 | Not Available | Positive | 4528358 - 4528954 | 22670.6 |
| hypothetical protein | B0O44_10818 | Not Available | Negative | 4529089 - 4529493 | 15103.3 |
| hypothetical protein | B0O44_10819 | Not Available | Positive | 4529900 - 4530136 | 8897.87 |
| ytka-like protein | B0O44_10820 | Not Available | Positive | 4530249 - 4531061 | 29799.1 |
| iron complex outermembrane receptor protein | B0O44_10821 | Not Available | Positive | 4531066 - 4533087 | 75215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

