Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_107263 | Not Available | Positive | 4498479 - 4499087 | 23554.5 |
| fecr family protein | B0O44_107264 | Not Available | Positive | 4499158 - 4500129 | 37018.7 |
| tonb-dependent receptor | B0O44_107265 | Not Available | Positive | 4500251 - 4503727 | 129364.0 |
| hypothetical protein | B0O44_107266 | Not Available | Positive | 4503730 - 4505439 | 62271.2 |
| hypothetical protein | B0O44_107267 | Not Available | Positive | 4505439 - 4506647 | 45049.2 |
| fasciclin domain-containing protein | B0O44_107268 | Not Available | Positive | 4506680 - 4507762 | 40643.5 |
| fasciclin domain-containing protein | B0O44_107269 | Not Available | Positive | 4507785 - 4509080 | 48077.5 |
| putative surface protein with fasciclin (fas1) repeats | B0O44_107270 | Not Available | Positive | 4509077 - 4510090 | 36826.3 |
| carboxypeptidase family protein | B0O44_107271 | Not Available | Positive | 4510102 - 4512638 | 92532.1 |
| hypothetical protein | B0O44_1081 | Not Available | Positive | 4512783 - 4513250 | 18203.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

