Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | B0O44_107253 | Not Available | Negative | 4487267 - 4488961 | 62987.6 |
| orotidine-5'-phosphate decarboxylase | B0O44_107254 | Not Available | Positive | 4489229 - 4490059 | 30913.1 |
| phage shock protein c (pspc) family protein | B0O44_107255 | Not Available | Positive | 4490213 - 4490434 | 8674.97 |
| s-dna-t family dna segregation atpase ftsk/spoiiie | B0O44_107256 | Not Available | Positive | 4490546 - 4493122 | 96949.2 |
| outer membrane lipoprotein-sorting protein | B0O44_107257 | Not Available | Positive | 4493115 - 4493804 | 25954.5 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | B0O44_107258 | Not Available | Positive | 4493849 - 4494610 | 28627.5 |
| Trna-leu | Not Available | Not Available | Positive | 4494665 - 4494748 | Not Available |
| hypothetical protein | B0O44_107260 | Not Available | Positive | 4494931 - 4495581 | 23821.9 |
| signal transduction histidine kinase | B0O44_107261 | Not Available | Negative | 4495599 - 4497407 | 68628.6 |
| lyttr family two component transcriptional regulator | B0O44_107262 | Not Available | Negative | 4497643 - 4498338 | 26699.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

