Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease protease subunit | B0O44_107243 | Not Available | Positive | 4477361 - 4478053 | 25667.9 |
| atp-dependent clp protease atp-binding subunit clpx | B0O44_107244 | Not Available | Positive | 4478055 - 4479293 | 45765.8 |
| amp nucleosidase | B0O44_107245 | Not Available | Positive | 4479399 - 4480262 | 31801.6 |
| phosphohistidine phosphatase | B0O44_107246 | Not Available | Negative | 4480305 - 4480808 | 19050.5 |
| heptosyltransferase-2 | B0O44_107247 | Not Available | Negative | 4480872 - 4481810 | 35296.1 |
| dna polymerase (family 10) | B0O44_107248 | Not Available | Negative | 4481870 - 4483561 | 63563.9 |
| protease-4 | B0O44_107249 | Not Available | Negative | 4483691 - 4485457 | 65121.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | B0O44_107250 | Not Available | Positive | 4485570 - 4486064 | 18410.6 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | B0O44_107251 | Not Available | Positive | 4486083 - 4486460 | 14558.4 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | B0O44_107252 | Not Available | Negative | 4486479 - 4487159 | 25317.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

