Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | B0O44_107223 | Not Available | Positive | 4455971 - 4458373 | 89795.8 |
| substrate-binding family protein | B0O44_107224 | Not Available | Positive | 4458389 - 4459210 | 32005.2 |
| uncharacterized protein duf1572 | B0O44_107225 | Not Available | Positive | 4459252 - 4459824 | 22389.5 |
| ompa family protein | B0O44_107226 | Not Available | Negative | 4459821 - 4460351 | 19759.8 |
| hypothetical protein | B0O44_107227 | Not Available | Positive | 4460462 - 4461535 | 39235.0 |
| aminopeptidase n | B0O44_107228 | Not Available | Negative | 4461596 - 4464079 | 93415.0 |
| putative acetyltransferase | B0O44_107229 | Not Available | Negative | 4464253 - 4464735 | 17654.3 |
| hypothetical protein | B0O44_107230 | Not Available | Positive | 4464867 - 4465253 | 14544.3 |
| 8-oxo-dgtp diphosphatase | B0O44_107231 | Not Available | Positive | 4465282 - 4465671 | 14294.4 |
| hypothetical protein | B0O44_107232 | Not Available | Positive | 4465819 - 4466184 | 13458.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

