Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | B0O44_107213 | Not Available | Positive | 4439688 - 4440938 | 47113.7 |
| putative abc transport system atp-binding protein | B0O44_107214 | Not Available | Positive | 4441035 - 4441733 | 26141.5 |
| abc-type antimicrobial peptide transport system permease subunit | B0O44_107215 | Not Available | Positive | 4441735 - 4444110 | 88330.0 |
| abc-type antimicrobial peptide transport system permease subunit | B0O44_107216 | Not Available | Positive | 4444127 - 4446490 | 88616.5 |
| putative permease | B0O44_107217 | Not Available | Positive | 4446507 - 4448897 | 88702.5 |
| putative abc transport system permease protein | B0O44_107218 | Not Available | Positive | 4448910 - 4451300 | 89857.5 |
| histidine kinase | B0O44_107219 | Not Available | Positive | 4451418 - 4452491 | 41179.0 |
| lyttr family two component transcriptional regulator | B0O44_107220 | Not Available | Positive | 4452488 - 4453207 | 27772.7 |
| hypothetical protein | B0O44_107221 | Not Available | Positive | 4453307 - 4455094 | 67730.0 |
| abc-type lipoprotein export system atpase subunit | B0O44_107222 | Not Available | Positive | 4455251 - 4455940 | 25557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

