Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase (ferredoxin) | B0O44_107203 | Not Available | Positive | 4426529 - 4428631 | 78412.2 |
| uroporphyrin-iii c-methyltransferase | B0O44_107204 | Not Available | Positive | 4428615 - 4429403 | 28185.2 |
| hypothetical protein | B0O44_107205 | Not Available | Positive | 4429416 - 4430879 | 52561.3 |
| phosphoadenosine phosphosulfate reductase | B0O44_107206 | Not Available | Positive | 4430931 - 4431635 | 27091.2 |
| sulfate adenylyltransferase subunit 2 | B0O44_107207 | Not Available | Positive | 4431649 - 4432554 | 34362.9 |
| sulfate adenylyltransferase subunit 1 | B0O44_107208 | Not Available | Positive | 4432554 - 4433804 | 46665.8 |
| starch synthase | B0O44_107209 | Not Available | Positive | 4434089 - 4435495 | 53133.7 |
| glucose-1-phosphate adenylyltransferase | B0O44_107210 | Not Available | Positive | 4435508 - 4436779 | 46938.0 |
| histidine kinase/dna gyrase b/hsp90-like atpase | B0O44_107211 | Not Available | Negative | 4436780 - 4438138 | 52195.1 |
| dna-binding ntrc family response regulator | B0O44_107212 | Not Available | Negative | 4438144 - 4439517 | 51549.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

