Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_107193 | Not Available | Positive | 4413247 - 4413396 | 5832.33 |
| methyltransferase family protein | B0O44_107194 | Not Available | Negative | 4413368 - 4413997 | 24687.2 |
| 3-methyladenine dna glycosylase alkc | B0O44_107195 | Not Available | Negative | 4414129 - 4415316 | 45269.3 |
| nadph-dependent ferric siderophore reductase | B0O44_107196 | Not Available | Positive | 4415532 - 4416377 | 31330.0 |
| hypothetical protein | B0O44_107197 | Not Available | Positive | 4416552 - 4419530 | 112336.0 |
| putative mfs family arabinose efflux permease | B0O44_107198 | Not Available | Positive | 4419598 - 4420848 | 45694.1 |
| hypothetical protein | B0O44_107199 | Not Available | Negative | 4420871 - 4421782 | 35055.4 |
| beta-galactosidase | B0O44_107200 | Not Available | Positive | 4421794 - 4424481 | 101183.0 |
| hypothetical protein | B0O44_107201 | Not Available | Negative | 4424502 - 4425242 | 28216.3 |
| s-formylglutathione hydrolase frmb | B0O44_107202 | Not Available | Positive | 4425477 - 4426301 | 31283.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

