Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | B0O44_107173 | Not Available | Positive | 4387108 - 4388973 | 68325.2 |
| uncharacterized protein duf4957 | B0O44_107174 | Not Available | Positive | 4388986 - 4390626 | 56662.0 |
| lysophospholipase l1-like esterase | B0O44_107175 | Not Available | Positive | 4390697 - 4391401 | 26487.7 |
| pectinesterase | B0O44_107176 | Not Available | Positive | 4391401 - 4392366 | 36013.7 |
| pectinesterase | B0O44_107177 | Not Available | Positive | 4392345 - 4393307 | 35699.2 |
| beta-xylosidase | B0O44_107178 | Not Available | Positive | 4393304 - 4394950 | 61494.2 |
| polyisoprenoid-binding protein ycei | B0O44_107179 | Not Available | Negative | 4395213 - 4395815 | 21892.3 |
| pectate lyase-like protein | B0O44_107180 | Not Available | Positive | 4395948 - 4397651 | 62330.3 |
| unsaturated rhamnogalacturonyl hydrolase | B0O44_107181 | Not Available | Positive | 4397654 - 4399597 | 72925.9 |
| pela/pel-15e family pectate lyase | B0O44_107182 | Not Available | Positive | 4399603 - 4400634 | 38832.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

