Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response ompr family regulator | B0O44_107153 | Not Available | Positive | 4353705 - 4354400 | 26231.9 |
| signal transduction histidine kinase | B0O44_107154 | Not Available | Positive | 4354397 - 4355647 | 47635.8 |
| hypothetical protein | B0O44_107155 | Not Available | Negative | 4355686 - 4356681 | 36594.1 |
| hypothetical protein | B0O44_107156 | Not Available | Negative | 4356691 - 4358070 | 48803.4 |
| tonb-dependent receptor | B0O44_107157 | Not Available | Negative | 4358076 - 4360856 | 103441.0 |
| purple acid phosphatase-like protein | B0O44_107158 | Not Available | Positive | 4361049 - 4362608 | 58515.5 |
| cytochrome c peroxidase | B0O44_107159 | Not Available | Positive | 4362628 - 4364421 | 66940.5 |
| hypothetical protein | B0O44_107160 | Not Available | Positive | 4364564 - 4364884 | 12377.2 |
| hypothetical protein | B0O44_107161 | Not Available | Negative | 4364901 - 4366088 | 45422.2 |
| putative metal-dependent hd superfamily phosphohydrolase | B0O44_107162 | Not Available | Positive | 4366138 - 4367361 | 46908.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

