Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | B0O44_107123 | Not Available | Positive | 4313700 - 4315163 | 54401.1 |
| alpha-glucosidase | B0O44_107124 | Not Available | Positive | 4315176 - 4317059 | 70022.2 |
| hypothetical protein | B0O44_107125 | Not Available | Positive | 4317066 - 4319354 | 85888.2 |
| carboxypeptidase-like protein | B0O44_107126 | Not Available | Positive | 4319480 - 4322191 | 101438.0 |
| uncharacterized protein duf4876 | B0O44_107127 | Not Available | Positive | 4322203 - 4323534 | 48102.4 |
| hypothetical protein | B0O44_107128 | Not Available | Positive | 4323534 - 4325063 | 58141.8 |
| cytochrome c peroxidase | B0O44_107129 | Not Available | Positive | 4325085 - 4326209 | 42358.0 |
| starch phosphorylase | B0O44_107130 | Not Available | Negative | 4326240 - 4327889 | 62971.3 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | B0O44_107131 | Not Available | Positive | 4328021 - 4328374 | 13305.2 |
| hypothetical protein | B0O44_107132 | Not Available | Negative | 4328379 - 4328588 | 7694.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

