Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-zinc-cadmium efflux system membrane fusion protein | B0O44_107113 | Not Available | Positive | 4297888 - 4298991 | 40424.7 |
| cobalt-zinc-cadmium resistance protein czca | B0O44_107114 | Not Available | Positive | 4299019 - 4302147 | 116083.0 |
| peptidase s46-like protein | B0O44_107115 | Not Available | Positive | 4302317 - 4304512 | 81791.1 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | B0O44_107116 | Not Available | Negative | 4304563 - 4305387 | 30637.3 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | B0O44_107117 | Not Available | Negative | 4305394 - 4306395 | 36250.9 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | B0O44_107118 | Not Available | Negative | 4306401 - 4307174 | 29075.3 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | B0O44_107119 | Not Available | Negative | 4307182 - 4307988 | 29132.7 |
| rna polymerase sigma-70 factor (family 1) | B0O44_107120 | Not Available | Positive | 4308267 - 4308842 | 22659.0 |
| fecr family protein | B0O44_107121 | Not Available | Positive | 4308938 - 4310065 | 41327.3 |
| tonb-linked susc/raga family outer membrane protein | B0O44_107122 | Not Available | Positive | 4310241 - 4313687 | 127966.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

