Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol-sensitive protein rard | B0O44_107103 | Not Available | Positive | 4287567 - 4288487 | 34142.2 |
| d-lactate dehydrogenase | B0O44_107104 | Not Available | Positive | 4288531 - 4289523 | 36839.6 |
| isopentenyl-diphosphate delta-isomerase | B0O44_107105 | Not Available | Negative | 4289509 - 4290045 | 20771.1 |
| hypothetical protein | B0O44_107106 | Not Available | Positive | 4290114 - 4290470 | 13632.8 |
| arac-like dna-binding protein | B0O44_107107 | Not Available | Negative | 4290478 - 4291380 | 34770.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | B0O44_107108 | Not Available | Negative | 4291406 - 4292257 | 31046.3 |
| beta-galactosidase | B0O44_107109 | Not Available | Positive | 4292386 - 4294359 | 74080.4 |
| dna-binding response ompr family regulator | B0O44_107110 | Not Available | Positive | 4294431 - 4295105 | 25474.6 |
| signal transduction histidine kinase | B0O44_107111 | Not Available | Positive | 4295109 - 4296458 | 51379.5 |
| cobalt-zinc-cadmium efflux system outer membrane protein | B0O44_107112 | Not Available | Positive | 4296580 - 4297875 | 49676.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

